Water exchange in lake basins is a very important process in regulating the health of the aquatic environment, e.g., by shaping algal blooms. Thus, knowledge of the process is also required to develop management strategies. The paper presents a dynamic of water renewal time in the Uściwierz chain of lakes, in which the natural hydrological connectivity of the catchment areas has been altered due to human impact. Calculations of water renewal were limited to the part of the lake basin corresponding to the active (dynamic) retention layer. A comparative analysis of the rate of potential water renewal, based on the structure difference index, was used as an indicator of the degree of anthropogenic transformation of water distribution in the lake catchments. The smallest differences in the structure of the water renewal rate between the neighboring lakes in the chain system were observed in the cold period, and the largest differences were observed in the warm period. The results showed that the shorter the timescale (5-day period), the higher the similarity in the structure of the water renewal rate between the lakes. Very large differences between the structure of the potential water renewal rate in Lakes Uściwierz and Bikcze indicated a significant transformation of the water cycle down the lake chain. The water renewal rate proved to be a good indicator of the degree of anthropogenic transformation in the catchments located in close proximity.